pipelines.chromake.scripts.paths

pipelines.chromake.scripts.paths

The paths module of chromake contains functions to identify the inputs and the files generated by the chromake pipeline.

Functions

Name Description
get_all_fastq_related_paths Get the path to the files generated by the pipeline for the samples of all sequencing and projects.
get_sequencing_fastq_related_paths Get the path to the files generated by the pipeline for the samples of a specific sequencing.